CDS

Accession Number TCMCG006C17667
gbkey CDS
Protein Id XP_022558973.1
Location complement(join(5603763..5604014,5604097..5604229,5604315..5604588,5604672..5604813,5604901..5604991,5605155..5605261,5605336..5605491,5605574..5605744,5605829..5605970,5606054..5606173,5606262..5606378,5606459..5606524,5606613..5606734,5606896..5607041,5607178..5607263,5608412..5608443))
Gene LOC106401657
GeneID 106401657
Organism Brassica napus

Protein

Length 718aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022703252.1
Definition probable rhamnogalacturonate lyase B [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Polysaccharide lyase family 4, domain II
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGATCCAGACTCACAGATCAACTATTGTCTGCATTTCGAGAAAGCTCCAAGACAAATCCGCTGATTTTATCATGTTTAAGTTGTCTTCACATGTTTACCAGCTCGTGGCGACCATAGGTTACCGGAGACACTTATTGAAACAGGGAGGATGGATCATTTCTTTGATCATGTTCTTGTCTTTGTTTGAAATTGCAATCTCCCAAAACCAAAGTTCTGATCCAGAATCAACACAAGTCTTGCAGTTACATTACCAAGATGGACATGTGGTGGTGGACAATGGCATTTTACAATTAACTTTGTCAAATCCTGAGGGATTTGTAACCGGAATACGGTACAATGGTATCGAAAATGTACTTGCCTACACCGGCAATGAACATGATAGAGGTTACTGGGACTTAGTGTGGAACTTTCCAGGGAAAAAAGTTAAGAAGTCCAAAGGCACATTAGACCGGATTGAAGCAACAAAGATGGAAGTGATAACGCAGAGCGATGAAAAGATAGAGCTATCGTTTTCAAGGACATGGAATGCTTCTTCAACGACGGCTCTTCCTCTGAATATAGACAAGAGGTTTGTAATGCTGCGAAACTCGTCAGGGTTCTACAGTTACGCCATCTTCGAGAGGCTAAAAGGGTGGCCTGCTGTTGAACTCGATAATATTCGATTAGTATTTAAGCTAAACCAGGACAAGTTTCATTACATGGCGATTTCAGATGAGAGGCAAAGGTACATGCCACTACCAGAAGATCGGATTCCTCCTCGAGGTAAACCTCTTGCTTACCCCGAGGCCGTTCAACTTCTCGACCCTATCGAGCCTGAGTTTAAAGGAGAGGTGGATGACAAGTATGAATACTCAATGGAGAGTAAAGACATAAAAGTTCATGGATGGATAAGCACAAATGACTCGGTTGGTTTCTGGCAAATCACTCCGAGCAACGAGTTCCGATCTGCTGGTCCTCTCAAGCAGTTCCTAGGCTCCCATGTCGGTCCAACCAACCTCGCGGTATTCCACAGCACTCACTATGTTGGAGCAGAACTCATCATGAGTTTTGAAGAAGGTGAAGCATGGAAGAAAGTGTTTGGACCTGTCTTTATTTATATGAACTCGTTTCCTAAAGGAGTTGATCCTCTCTTGCTATGGACTCAGGCCAAGAACCAGACAAAGATTGAAGAAGAGAAATGGCCTTATAACTTCACAGGGTCAAGTGACTACCCTTCATCTGACCAAAGAGGATCTGTTACCGGTCGATTACTTGTCCGAGACCGATACATAAGGAGTGAGGATATACCTGCGAATGGGTCCTACGTTGGTTTGGCTGCACCAGGAGATGTTGGCTCATGGCAAAGAGAATACAAAGGTTATCAGTTCTGGTCAAAGGCCGACGAGAAGGGATACTTTTCTATCAACAATGTGAGAACTGGTCGTTACAATCTCTATGCATTTGTTCCTGGATTCATCGGTGATTACCACAACCAGACGGTTTTCGACATCTCTCCAGGTACGAATATTAGCCTAGGCGACTTGGTGTATGAACCTCCAAGAGACGGTGTAACTCTATGGGAGATCGGTGTACCAGACCGAACCGCTGCAGAGTTCTACATTCCTGACCCTAACCCGACGTTTACTAACAAACTATACCTAAACCGTTCTGATAAATACAGACAATATGGATTATGGGAACGGTATGCCGAACTGTACCCCCATGAAGATATGGTTTACAATGTTGATGTTGATGATTACTCCAAAAACTGGTTCTACATGCAAGTTACAAGGAAGCAAGCAGATGGAGGATACAATGGTACTACATGGCAGATCAAGTTTCAACTCAACGATAAAATGAAAAATTTTACTGGAAATTTCAAACTGAGGATCGCTCTAGCCACATCAAATGTAGCAGAACTTCAGGTTCGGGTGAATGATTTATCAGTGGATCCACCATTGTTTACAACGGGGGAGATAGGAAAGGATAATACGATTGCAAGACATGGTATACATGGACTCTATTGGCTATACAGTGTGAATGTTCCAGCTTCTTCTCTCCGCCATGGGAATAACACTATATATCTAACCCAACCGCTTGCCATAAGCCCTTTTCAAGGACTCATGTATGACTATATTCGTCTCGAGTGTCCTGATTCCATCAGTCATCTCACTTAG
Protein:  
MIQTHRSTIVCISRKLQDKSADFIMFKLSSHVYQLVATIGYRRHLLKQGGWIISLIMFLSLFEIAISQNQSSDPESTQVLQLHYQDGHVVVDNGILQLTLSNPEGFVTGIRYNGIENVLAYTGNEHDRGYWDLVWNFPGKKVKKSKGTLDRIEATKMEVITQSDEKIELSFSRTWNASSTTALPLNIDKRFVMLRNSSGFYSYAIFERLKGWPAVELDNIRLVFKLNQDKFHYMAISDERQRYMPLPEDRIPPRGKPLAYPEAVQLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAVFHSTHYVGAELIMSFEEGEAWKKVFGPVFIYMNSFPKGVDPLLLWTQAKNQTKIEEEKWPYNFTGSSDYPSSDQRGSVTGRLLVRDRYIRSEDIPANGSYVGLAAPGDVGSWQREYKGYQFWSKADEKGYFSINNVRTGRYNLYAFVPGFIGDYHNQTVFDISPGTNISLGDLVYEPPRDGVTLWEIGVPDRTAAEFYIPDPNPTFTNKLYLNRSDKYRQYGLWERYAELYPHEDMVYNVDVDDYSKNWFYMQVTRKQADGGYNGTTWQIKFQLNDKMKNFTGNFKLRIALATSNVAELQVRVNDLSVDPPLFTTGEIGKDNTIARHGIHGLYWLYSVNVPASSLRHGNNTIYLTQPLAISPFQGLMYDYIRLECPDSISHLT